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Cell Processor Based Sequence Alignment


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  • Product Description

The project focuses on using the capabilities of Cell processor for computing sequence alignments. In order to achieve this, existing algorithms used for sequence alignment need to be rewritten so that they could be efficiently executed on Cell processor. This process involves making use of two main features of Cell processors - parallelisation and vectorisation, which ensure achieving maximum performance. Two main algorithms for sequence alignment to be analyzed in this project are Needleman-Wunsch (for global sequence alignment) and Smith-Waterman (for local sequence alignment) algorithm. These algorithms are well established on regular PC platforms, but are still not widely used on Cell processors. This project will take full power of Cell processors, and put it in function of these algorithms, analyzing performance improvements and speedup.

Product Specifications
SKU :COC72831
AuthorMilos Boskovic
Number of Pages184
Publishing Year2011-03-22T00:00:00.000
Edition1 st
Book TypeComputer hardware
Country of ManufactureIndia
Product BrandLAP LAMBERT Academic Publishing
Product Packaging InfoBox
In The Box1 Piece
Product First Available On ClickOnCare.com2015-10-08 00:00:00