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Docking Approach And Study Of Some Docking Parameters With MOE


Marketed By :  LAP LAMBERT Academic Publishing   Sold By :  Kamal Books International  
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  • Product Description

Computational approaches like docking of the small ligand molecules into large molecular targets and then to score their complementarily to binding sites are used extensively in drug discovery. The number of docking/scoring functions are increasing rapidly that use different scoring and sampling algorithms. The effectiveness of such approaches entirely depends upon reliable scoring function. Comparative studies are needed to evaluate their current capabilities. This study was conducted to analyze the effectiveness of MOE (MOLECULAR OPERATING ENVIRONMENT) in docking of small ligand molecules and decoys to macromolecular protein targets using force field, without using force field and Proxy triangle scoring functions. It was found that using force field scoring function showed a significant correlation between binding affinities predicted scores of the docked complex. Using this approach correct binding mode was identified with highest scoring among sampled poses. It was clear from the results that selecting a suitable scoring function is crucial for the evaluation of docking algorithm. The selection of scoring function is dependent on the selected target.

Product Specifications
SKU :COC76803
AuthorMuhammad Akram
Number of Pages80
Publishing Year2014-06-05T00:00:00.000
Edition1 st
Book TypePharmacology
Country of ManufactureIndia
Product BrandLAP LAMBERT Academic Publishing
Product Packaging InfoBox
In The Box1 Piece
Product First Available On ClickOnCare.com2015-10-08 00:00:00